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1000 Titel
  • Developing survival prediction models in colorectal cancer using epigenome-wide DNA methylation data from whole blood
1000 Autor/in
  1. Fan, Ziwen |
  2. Edelmann, Dominic |
  3. Yuan, Tanwei |
  4. Köhler, Bruno Christian |
  5. Hoffmeister, Michael |
  6. Brenner, Hermann |
1000 Verlag Nature Publishing Group UK
1000 Erscheinungsjahr 2024
1000 Publikationstyp
  1. Artikel |
1000 Online veröffentlicht
  • 2024-09-06
1000 Erschienen in
1000 Quellenangabe
  • 8(1):191
1000 Copyrightjahr
  • 2024
1000 Lizenz
1000 Verlagsversion
  • https://doi.org/10.1038/s41698-024-00689-5 |
  • https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11377733/ |
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1000 Sprache der Publikation
1000 Abstract/Summary
  • <jats:title>Abstract</jats:title><jats:p>While genome-wide association studies are valuable in identifying CRC survival predictors, the benefit of adding blood DNA methylation (blood-DNAm) to clinical features, including the TNM system, remains unclear. In a multi-site population-based patient cohort study of 2116 CRC patients with baseline blood-DNAm, we analyzed survival predictions using eXtreme Gradient Boosting with a 5-fold nested leave-sites-out cross-validation across four groups: traditional and comprehensive clinical features, blood-DNAm, and their combination. Model performance was assessed using time-dependent ROC curves and calibrations. During a median follow-up of 10.3 years, 1166 patients died. Although blood-DNAm-based predictive signatures achieved moderate performances, predictive signatures based on clinical features outperformed blood-DNAm signatures. The inclusion of blood-DNAm did not improve survival prediction over clinical features. M1 stage, age at blood collection, and N2 stage were the top contributors. Despite some prognostic value, incorporating blood DNA methylation did not enhance survival prediction of CRC patients beyond clinical features.</jats:p>
1000 Sacherschließung
lokal /692/4028/67/68/2486
lokal Article
lokal /692/4028/67/1504/1885
lokal /692/53/2422
lokal article
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1000 Liste der Beteiligten
  1. https://frl.publisso.de/adhoc/uri/RmFuLCBaaXdlbg==|https://frl.publisso.de/adhoc/uri/RWRlbG1hbm4sIERvbWluaWM=|https://orcid.org/0000-0001-7387-6327|https://frl.publisso.de/adhoc/uri/S8O2aGxlciwgQnJ1bm8gQ2hyaXN0aWFu|https://orcid.org/0000-0002-8307-3197|https://orcid.org/0000-0002-6129-1572
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1000 Erstellt am 2025-07-05T07:10:24.521+0200
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