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1000 Titel
  • Open-source tools for behavioral video analysis: Setup, methods, and best practices
1000 Autor/in
  1. Luxem, Kevin |
  2. Sun, Jennifer |
  3. Bradley, Sean P. |
  4. Krishnan, Keerthi |
  5. Yttri, Eric |
  6. Zimmermann, Jan |
  7. Pereira, Talmo |
  8. Laubach, Mark |
1000 Erscheinungsjahr 2023
1000 LeibnizOpen
1000 Publikationstyp
  1. Artikel |
1000 Online veröffentlicht
  • 2023-03-23
1000 Erschienen in
1000 Quellenangabe
  • 12:e79305
1000 FRL-Sammlung
1000 Lizenz
1000 Verlagsversion
  • https://doi.org/10.7554/eLife.79305 |
  • https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10036114/ |
1000 Publikationsstatus
1000 Begutachtungsstatus
1000 Sprache der Publikation
1000 Abstract/Summary
  • Recently developed methods for video analysis, especially models for pose estimation and behavior classification, are transforming behavioral quantification to be more precise, scalable, and reproducible in fields such as neuroscience and ethology. These tools overcome long-standing limitations of manual scoring of video frames and traditional 'center of mass' tracking algorithms to enable video analysis at scale. The expansion of open-source tools for video acquisition and analysis has led to new experimental approaches to understand behavior. Here, we review currently available open-source tools for video analysis and discuss how to set up these methods for labs new to video recording. We also discuss best practices for developing and using video analysis methods, including community-wide standards and critical needs for the open sharing of datasets and code, more widespread comparisons of video analysis methods, and better documentation for these methods especially for new users. We encourage broader adoption and continued development of these tools, which have tremendous potential for accelerating scientific progress in understanding the brain and behavior.
1000 Sacherschließung
lokal video
lokal reproducibility
lokal methods
lokal behavior
lokal pose estimation
lokal neuroscience
lokal open source
1000 Fächerklassifikation (DDC)
1000 Liste der Beteiligten
  1. https://frl.publisso.de/adhoc/uri/THV4ZW0sIEtldmlu|https://orcid.org/0000-0002-0906-6589|https://frl.publisso.de/adhoc/uri/QnJhZGxleSwgU2VhbiBQLg==|https://frl.publisso.de/adhoc/uri/S3Jpc2huYW4sIEtlZXJ0aGk=|https://frl.publisso.de/adhoc/uri/WXR0cmksIEVyaWM=|https://frl.publisso.de/adhoc/uri/WmltbWVybWFubiwgSmFu|https://orcid.org/0000-0001-9075-8365|https://orcid.org/0000-0002-2403-4497
1000 Label
1000 Förderer
  1. National Science Foundation |
  2. National Institutes of Health |
  3. Natural Sciences and Engineering Research Council of Canada |
1000 Fördernummer
  1. 1948181; 2024581
  2. DA046375; MH002952; MH124042; MH128177
  3. PGSD3-532647-2019
1000 Förderprogramm
  1. -
  2. -
  3. -
1000 Dateien
1000 Förderung
  1. 1000 joinedFunding-child
    1000 Förderer National Science Foundation |
    1000 Förderprogramm -
    1000 Fördernummer 1948181; 2024581
  2. 1000 joinedFunding-child
    1000 Förderer National Institutes of Health |
    1000 Förderprogramm -
    1000 Fördernummer DA046375; MH002952; MH124042; MH128177
  3. 1000 joinedFunding-child
    1000 Förderer Natural Sciences and Engineering Research Council of Canada |
    1000 Förderprogramm -
    1000 Fördernummer PGSD3-532647-2019
1000 Objektart article
1000 Beschrieben durch
1000 @id frl:6441171.rdf
1000 Erstellt am 2023-03-30T10:29:59.390+0200
1000 Erstellt von 242
1000 beschreibt frl:6441171
1000 Bearbeitet von 317
1000 Zuletzt bearbeitet Thu Jul 20 09:50:27 CEST 2023
1000 Objekt bearb. Tue May 02 06:57:39 CEST 2023
1000 Vgl. frl:6441171
1000 Oai Id
  1. oai:frl.publisso.de:frl:6441171 |
1000 Sichtbarkeit Metadaten public
1000 Sichtbarkeit Daten public
1000 Gegenstand von

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