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1000 Titel
  • Effect of MRI acquisition acceleration via compressed sensing and parallel imaging on brain volumetry
1000 Autor/in
  1. Dieckmeyer, Michael |
  2. Roy, Abhijit Guha |
  3. Senapati, Jyotirmay |
  4. Wachinger, Christian |
  5. Grundl, Lioba |
  6. Döpfert, Jörg |
  7. Bertran, Pere Ferrera |
  8. Lemke, Andreas |
  9. Zimmer, Claus |
  10. Kirschke, Jan S. |
  11. Hedderich, Dennis M. |
1000 Erscheinungsjahr 2021
1000 Publikationstyp
  1. Artikel |
1000 Online veröffentlicht
  • 2021-01-27
1000 Erschienen in
1000 Quellenangabe
  • 34(4):487-497
1000 Copyrightjahr
  • 2021
1000 Lizenz
1000 Verlagsversion
  • https://doi.org/10.1007/s10334-020-00906-9 |
  • https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8338844/ |
1000 Publikationsstatus
1000 Begutachtungsstatus
1000 Sprache der Publikation
1000 Abstract/Summary
  • Objectives!#!To investigate the effect of compressed SENSE (CS), an acceleration technique combining parallel imaging and compressed sensing, on potential bias and precision of brain volumetry and evaluate it in the context of normative brain volumetry.!##!Materials and methods!#!In total, 171 scans from scan-rescan experiments on three healthy subjects were analyzed. Each subject received 3D-T1-weighted brain MRI scans at increasing degrees of acceleration (CS-factor = 1/4/8/12/16/20/32). Single-scan acquisition times ranged from 00:41 min (CS-factor = 32) to 21:52 min (CS-factor = 1). Brain segmentation and volumetry was performed using two different software tools: md.brain, a proprietary software based on voxel-based morphometry, and FreeSurfer, an open-source software based on surface-based morphometry. Four sub-volumes were analyzed: brain parenchyma (BP), total gray matter, total white matter, and cerebrospinal fluid (CSF). Coefficient of variation (CoV) of the repeated measurements as a measure of intra-subject reliability was calculated. Intraclass correlation coefficient (ICC) with regard to increasing CS-factor was calculated as another measure of reliability. Noise-to-contrast ratio as a measure of image quality was calculated for each dataset to analyze the association between acceleration factor, noise and volumetric brain measurements.!##!Results!#!For all sub-volumes, there is a systematic bias proportional to the CS-factor which is dependent on the utilized software and subvolume. Measured volumes deviated significantly from the reference standard (CS-factor = 1), e.g. ranging from 1 to 13% for BP. The CS-induced systematic bias is driven by increased image noise. Except for CSF, reliability of brain volumetry remains high, demonstrated by low CoV (< 1% for CS-factor up to 20) and good to excellent ICC for CS-factor up to 12.!##!Conclusion!#!CS-acceleration has a systematic biasing effect on volumetric brain measurements.
1000 Sacherschließung
lokal Female [MeSH]
lokal Brain
lokal Brain/diagnostic imaging [MeSH]
lokal Adult [MeSH]
lokal Humans [MeSH]
lokal Acceleration
lokal Acceleration [MeSH]
lokal Basic Science - Parametric mapping and quantitative MRI
lokal Systematic bias
lokal Parenchymal Tissue/diagnostic imaging [MeSH]
lokal Gray Matter/diagnostic imaging [MeSH]
lokal Cerebrospinal Fluid/diagnostic imaging [MeSH]
lokal Male [MeSH]
lokal Reproducibility of Results [MeSH]
lokal White Matter/diagnostic imaging [MeSH]
lokal Magnetic Resonance Imaging/standards [MeSH]
lokal Healthy Volunteers [MeSH]
lokal Image Processing, Computer-Assisted [MeSH]
lokal Neuroimaging [MeSH]
lokal Magnetic resonance imaging
lokal Magnetic Resonance Imaging/methods [MeSH]
lokal Imaging, Three-Dimensional [MeSH]
lokal Research Article
1000 Liste der Beteiligten
  1. https://orcid.org/0000-0002-8349-4813|https://frl.publisso.de/adhoc/uri/Um95LCBBYmhpaml0IEd1aGE=|https://frl.publisso.de/adhoc/uri/U2VuYXBhdGksIEp5b3Rpcm1heQ==|https://frl.publisso.de/adhoc/uri/V2FjaGluZ2VyLCBDaHJpc3RpYW4=|https://frl.publisso.de/adhoc/uri/R3J1bmRsLCBMaW9iYQ==|https://frl.publisso.de/adhoc/uri/RMO2cGZlcnQsIErDtnJn|https://frl.publisso.de/adhoc/uri/QmVydHJhbiwgUGVyZSBGZXJyZXJh|https://frl.publisso.de/adhoc/uri/TGVta2UsIEFuZHJlYXM=|https://frl.publisso.de/adhoc/uri/WmltbWVyLCBDbGF1cw==|https://frl.publisso.de/adhoc/uri/S2lyc2Noa2UsIEphbiBTLg==|https://frl.publisso.de/adhoc/uri/SGVkZGVyaWNoLCBEZW5uaXMgTS4=
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1000 Erstellt am 2023-05-04T10:32:02.011+0200
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