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1000 Titel
  • A new primer pair for barcoding of bees (Hymenoptera: Anthophila) without amplifying the orthologous coxA gene of Wolbachia bacteria
1000 Autor/in
  1. Bleidorn, Christoph |
  2. Henze, Katharina |
1000 Erscheinungsjahr 2021
1000 Publikationstyp
  1. Artikel |
1000 Online veröffentlicht
  • 2021-11-25
1000 Erschienen in
1000 Quellenangabe
  • 14(1):427
1000 Copyrightjahr
  • 2021
1000 Lizenz
1000 Verlagsversion
  • https://doi.org/10.1186/s13104-021-05845-9 |
  • https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8613946/ |
1000 Publikationsstatus
1000 Sprache der Publikation
1000 Abstract/Summary
  • Objectives!#!DNA barcoding became an effective method for the identification and monitoring of bees. However, standard primer pairs used for barcoding often result in (co-) amplification of bacterial endosymbionts of the genus Wolbachia, which are widespread among bee species. Here we designed a new primer pair and compared it with the performance of the standard Folmer-primers for a small sample set of bees representing the main taxonomic groups of bees.!##!Results!#!The newly designed primer pair (BeeCox1F1/BeeCox1R2) outperformed the standard barcoding primer (LCO1490/HCO2198). By generating barcodes for a small test set of bees we found that the new primer pair produced high-quality sequences in all cases for unambiguous species identification using BOLD. Conversely, the standard barcoding primers often co-amplified the homologous Wolbachia gene and resulted in mixed chromatogram signals. These sequences showed high similarity with the bacterial endosymbiont instead of the host.
1000 Sacherschließung
lokal Hip [MeSH]
lokal Bacteria [MeSH]
lokal Biomonitoring
lokal Bees/genetics [MeSH]
lokal DNA barcoding
lokal Misamplification
lokal Hymenoptera [MeSH]
lokal Animals [MeSH]
lokal Apoidea
lokal Research Note
lokal Wolbachia/genetics [MeSH]
lokal DNA Barcoding, Taxonomic [MeSH]
1000 Liste der Beteiligten
  1. https://orcid.org/0000-0001-7295-6616|https://frl.publisso.de/adhoc/uri/SGVuemUsIEthdGhhcmluYQ==
1000 Hinweis
  • DeepGreen-ID: 52a743f1292841c6ae6e3f8c3fc75513 ; metadata provieded by: DeepGreen (https://www.oa-deepgreen.de/api/v1/), LIVIVO search scope life sciences (http://z3950.zbmed.de:6210/livivo), Crossref Unified Resource API (https://api.crossref.org/swagger-ui/index.html), to.science.api (https://frl.publisso.de/), ZDB JSON-API (beta) (https://zeitschriftendatenbank.de/api/), lobid - Dateninfrastruktur für Bibliotheken (https://lobid.org/resources/search)
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1000 Erstellt am 2023-11-15T23:20:23.212+0100
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1000 Zuletzt bearbeitet Thu Nov 30 22:46:03 CET 2023
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1000 Oai Id
  1. oai:frl.publisso.de:frl:6463987 |
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