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1000 Titel
  • Variplex™ test system fails to reliably detect SARS-CoV-2 directly from respiratory samples without RNA extraction
1000 Autor/in
  1. Eckel, Florian |
  2. Küsters, Franziska |
  3. Drossel, Bernhard |
  4. Konert, Markus |
  5. Mattes, Hans |
  6. Schopf, Stefan |
1000 Erscheinungsjahr 2020
1000 Publikationstyp
  1. Artikel |
1000 Online veröffentlicht
  • 2020-07-17
1000 Erschienen in
1000 Quellenangabe
  • 39(12):2373-2377
1000 Copyrightjahr
  • 2020
1000 Lizenz
1000 Verlagsversion
  • https://doi.org/10.1007/s10096-020-03983-9 |
  • https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7367510/ |
1000 Publikationsstatus
1000 Sprache der Publikation
1000 Abstract/Summary
  • Diagnosis of COVID is performed by PCR methods, but their capacity is limited by the requirement of high-level facilities and instruments. The loop-mediated isothermal amplification (LAMP) method has been utilized for the detection of isolated virus-specific RNA. Preliminary data suggest the possibility of isothermal amplification directly from respiratory samples without RNA extraction. All patients admitted to our hospital were screened for SARS-CoV-2 by routine. Respiratory samples were tested by variplex system based on LAMP method directly without RNA extraction and by PCR. Primary endpoint was the false-negative rate of variplex test compared with PCR as gold standard. In 109 patients variplex test and PCR assay were performed simultaneously. Median age was 80 years and male/female ratio was 40/60%. The prevalence of PCR-confirmed COVID diagnosis was 43.1%. Variplex test was positive in 13.8%. False-negative rate of variplex test compared with PCR was 83.0%. The potential of LAMP technology using isolated RNA has been demonstrated impressively by others, and excellent sensitivity and specificity of detecting SARS-CoV-2 has been reported. However, without RNA extraction, the variplex test system failed to reliably detect SARS-CoV-2 directly in respiratory samples.
1000 Sacherschließung
gnd 1206347392 COVID-19
lokal Aged, 80 and over [MeSH]
lokal Aged [MeSH]
lokal COVID-19 Testing [MeSH]
lokal Coronavirus Infections/blood [MeSH]
lokal Coronavirus Infections/mortality [MeSH]
lokal RNA, Viral/blood [MeSH]
lokal COVID-19 diagnostic testing
lokal Germany/epidemiology [MeSH]
lokal Pneumonia, Viral/blood [MeSH]
lokal Original Article
lokal Sensitivity and Specificity [MeSH]
lokal Male [MeSH]
lokal COVID-19 [MeSH]
lokal Nasopharynx/virology [MeSH]
lokal False Negative Reactions [MeSH]
lokal SARS-CoV-2 [MeSH]
lokal Clinical Laboratory Techniques/methods [MeSH]
lokal SARS-CoV-2
lokal Specificity and sensitivity
lokal Betacoronavirus/pathogenicity [MeSH]
lokal Female [MeSH]
lokal Oropharynx/virology [MeSH]
lokal Coronavirus Infections/diagnosis [MeSH]
lokal Betacoronavirus/genetics [MeSH]
lokal Humans [MeSH]
lokal False-negative reactions
lokal Severity of Illness Index [MeSH]
lokal Survival Analysis [MeSH]
lokal RNA, Viral/genetics [MeSH]
lokal Retrospective Studies [MeSH]
lokal Coronavirus Infections/epidemiology [MeSH]
lokal Pandemics [MeSH]
lokal Pneumonia, Viral/mortality [MeSH]
lokal Loop-mediated isothermal amplification
lokal Reagent Kits, Diagnostic/standards [MeSH]
lokal Pneumonia, Viral/diagnosis [MeSH]
lokal Reverse Transcriptase Polymerase Chain Reaction/standards [MeSH]
lokal Nucleic Acid Amplification Techniques/methods [MeSH]
lokal Molecular Diagnostic Techniques/methods [MeSH]
lokal Pneumonia, Viral/epidemiology [MeSH]
lokal Infectious disease outbreaks
1000 Liste der Beteiligten
  1. https://orcid.org/0000-0001-7341-9046|https://frl.publisso.de/adhoc/uri/S8O8c3RlcnMsIEZyYW56aXNrYQ==|https://frl.publisso.de/adhoc/uri/RHJvc3NlbCwgQmVybmhhcmQ=|https://frl.publisso.de/adhoc/uri/S29uZXJ0LCBNYXJrdXM=|https://frl.publisso.de/adhoc/uri/TWF0dGVzLCBIYW5z|https://frl.publisso.de/adhoc/uri/U2Nob3BmLCBTdGVmYW4=
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1000 Erstellt am 2023-11-17T14:32:59.835+0100
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