Integration of variation data through SPARQLMicro-Services

  1. Metereau, Frederic
  2. MICHEL, Franck ORCID logo
  3. Larmande, Pierre ORCID logo
  4. Sempéré, Guilhem ORCID logo
  5. Faron, Catherine ORCID logo

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49_Metereau_SWAT4CHLS-2024_frl6473255_coverpage.pdf 647,29KB
WeightNameValue
1000 Titel
  • Integration of variation data through SPARQLMicro-Services
1000 Autor/in
  1. Metereau, Frederic |
  2. MICHEL, Franck |
  3. Larmande, Pierre |
  4. Sempéré, Guilhem |
  5. Faron, Catherine |
1000 Erscheinungsjahr 2024
1000 Publikationstyp
  1. Kongressschrift |
1000 Online veröffentlicht
  • 2024-03
1000 Erschienen in
1000 Übergeordneter Kongress
1000 Lizenz
1000 Verlagsversion
  • https://www.swat4ls.org/workshops/leiden2024/programme/accepted-submissions-swat4hcls-2024/ |
1000 Publikationsstatus
1000 Begutachtungsstatus
1000 Sprache der Publikation
1000 Abstract/Summary
  • Integrating genetic variations data is essential to understand the interactions involving multiple genes in complex diseases. However, managing and extracting meaningful information from a large volume of genotyping data is challenging. This work aims to interconnect efficiently a MongoDB database with an RDF database through SPARQL Micro-Services. We first developed an RDF Model reusing existing ontologies and implemented it. Then, we evaluated some examples of queries interconnecting two applications Gigwa (MongoDB) and AgroLD (SPARQL endpoint).
1000 Sacherschließung
lokal MongoDB
lokal Genetic variations
lokal Knowledge Graphs
lokal FAIR data
lokal Bioinformatics
1000 Fächerklassifikation (DDC)
1000 DOI 10.4126/FRL01-006473255 |
1000 Liste der Beteiligten
  1. https://frl.publisso.de/adhoc/uri/TWV0ZXJlYXUsIEZyZWRlcmlj|https://orcid.org/0000-0001-9064-0463|https://orcid.org/0000-0002-2923-9790|https://orcid.org/0000-0001-7429-2091|https://orcid.org/0000-0001-5959-5561
1000 Label
1000 Fördernummer
  1. -
1000 Förderprogramm
  1. -
1000 Dateien
  1. Integration of variation data through SPARQLMicro-Services
    Integration of variation data through SPARQLMicro-Services
1000 Objektart article
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1000 @id frl:6473255.rdf
1000 Erstellt am 2024-02-23T08:07:53.003+0100
1000 Erstellt von 338
1000 beschreibt frl:6473255
1000 Bearbeitet von 339
1000 Zuletzt bearbeitet 2024-03-20T09:47:20.698+0100
1000 Objekt bearb. Wed Mar 20 09:46:58 CET 2024
1000 Vgl. frl:6473255
1000 Oai Id
  1. oai:frl.publisso.de:frl:6473255 |
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