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Ullah-Plant Phenomics-2024.pdf 7,82MB
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1000 Titel
  • High-throughput spike detection in greenhouse cultivated grain crops with attention mechanisms-based deep learning models
1000 Autor/in
  1. Ullah, Sajid |
  2. Panzarová, Klará |
  3. Trtílek, Martin |
  4. Lexa, Matej |
  5. Máčala, Vojtěch |
  6. Neumann, Kerstin |
  7. Altmann, Thomas |
  8. Hejátko, Jan |
  9. Pernisová, Markéta |
  10. Gladilin, Evgeny |
1000 Erscheinungsjahr 2024
1000 LeibnizOpen
1000 Publikationstyp
  1. Artikel |
1000 Online veröffentlicht
  • 2024-03-11
1000 Erschienen in
1000 Quellenangabe
  • 6:0155
1000 FRL-Sammlung
1000 Copyrightjahr
  • 2024
1000 Lizenz
1000 Verlagsversion
  • https://dx.doi.org/10.34133/plantphenomics.0155 |
  • https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10927539/ |
1000 Publikationsstatus
1000 Begutachtungsstatus
1000 Sprache der Publikation
1000 Abstract/Summary
  • Detection of spikes is the first important step toward image-based quantitative assessment of crop yield. However, spikes of grain plants occupy only a tiny fraction of the image area and often emerge in the middle of the mass of plant leaves that exhibit similar colors to spike regions. Consequently, accurate detection of grain spikes renders, in general, a non-trivial task even for advanced, state-of-the-art deep neural networks (DNNs). To improve pattern detection in spikes, we propose architectural changes to Faster-RCNN (FRCNN) by reducing feature extraction layers and introducing a global attention module. The performance of our extended FRCNN-A vs. conventional FRCNN was compared on images of different European wheat cultivars, including "difficult" bushy phenotypes from 2 different phenotyping facilities and optical setups. Our experimental results show that introduced architectural adaptations in FRCNN-A helped to improve spike detection accuracy in inner regions. The mean average precision (mAP) of FRCNN and FRCNN-A on inner spikes is 76.0% and 81.0%, respectively, while on the state-of-the-art detection DNNs, Swin Transformer mAP is 83.0%. As a lightweight network, FRCNN-A is faster than FRCNN and Swin Transformer on both baseline and augmented training datasets. On the FastGAN augmented dataset, FRCNN achieved a mAP of 84.24%, FRCNN-A attained a mAP of 85.0%, and the Swin Transformer achieved a mAP of 89.45%. The increase in mAP of DNNs on the augmented datasets is proportional to the amount of the IPK original and augmented images. Overall, this study indicates a superior performance of attention mechanisms-based deep learning models in detecting small and subtle features of grain spikes.
1000 Fächerklassifikation (DDC)
1000 Liste der Beteiligten
  1. https://frl.publisso.de/adhoc/uri/VWxsYWgsIFNhamlk|https://frl.publisso.de/adhoc/uri/UGFuemFyb3bDoSwgS2xhcsOh|https://frl.publisso.de/adhoc/uri/VHJ0w61sZWssIE1hcnRpbg==|https://frl.publisso.de/adhoc/uri/TGV4YSwgTWF0ZWo=|https://frl.publisso.de/adhoc/uri/TcOhxI1hbGEsIFZvanTEm2No|https://orcid.org/0000-0001-7451-7086|https://orcid.org/0000-0002-3759-360X|https://frl.publisso.de/adhoc/uri/SGVqw6F0a28sIEphbiA=|https://frl.publisso.de/adhoc/uri/UGVybmlzb3bDoSwgTWFya8OpdGEg|https://orcid.org/0000-0002-6153-727X
1000 Label
1000 Förderer
  1. European Regional Development Fund |
1000 Fördernummer
  1. CZ.02.1.01/0.0/0.0/16_026/0008446
1000 Förderprogramm
  1. SINGING PLANT
1000 Dateien
1000 Förderung
  1. 1000 joinedFunding-child
    1000 Förderer European Regional Development Fund |
    1000 Förderprogramm SINGING PLANT
    1000 Fördernummer CZ.02.1.01/0.0/0.0/16_026/0008446
1000 Objektart article
1000 Beschrieben durch
1000 @id frl:6474021.rdf
1000 Erstellt am 2024-04-04T14:58:16.625+0200
1000 Erstellt von 325
1000 beschreibt frl:6474021
1000 Bearbeitet von 317
1000 Zuletzt bearbeitet 2024-06-17T07:56:51.804+0200
1000 Objekt bearb. Mon Jun 17 07:56:27 CEST 2024
1000 Vgl. frl:6474021
1000 Oai Id
  1. oai:frl.publisso.de:frl:6474021 |
1000 Sichtbarkeit Metadaten public
1000 Sichtbarkeit Daten public
1000 Gegenstand von

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