Unraveling biogeographical patterns and environmental drivers of soil fungal diversity at the French national scale

  1. Djemiel, Christophe
  2. Dequiedt, Samuel
  3. Horrigue, Walid
  4. Bailly, Arthur
  5. Lelièvre, Mélanie
  6. Tripied, Julie
  7. Guilland, Charles
  8. Perrin, Solène
  9. Comment, Gwendoline
  10. Saby, Nicolas P. A.
  11. Jolivet, Claudy
  12. Bispo, Antonio
  13. Boulonne, Line
  14. Pierart, Antoine
  15. Wincker, Patrick
  16. Cruaud, Corinne
  17. Maron, Pierre-Alain
  18. Terrat, Sébastien
  19. Ranjard, Lionel

Download
soil-10-251-2024.pdf 6,82MB
WeightNameValue
1000 Titel
  • Unraveling biogeographical patterns and environmental drivers of soil fungal diversity at the French national scale
1000 Autor/in
  1. Djemiel, Christophe |
  2. Dequiedt, Samuel |
  3. Horrigue, Walid |
  4. Bailly, Arthur |
  5. Lelièvre, Mélanie |
  6. Tripied, Julie |
  7. Guilland, Charles |
  8. Perrin, Solène |
  9. Comment, Gwendoline |
  10. Saby, Nicolas P. A. |
  11. Jolivet, Claudy |
  12. Bispo, Antonio |
  13. Boulonne, Line |
  14. Pierart, Antoine |
  15. Wincker, Patrick |
  16. Cruaud, Corinne |
  17. Maron, Pierre-Alain |
  18. Terrat, Sébastien |
  19. Ranjard, Lionel |
1000 Verlag
  • Copernicus Publications
1000 Erscheinungsjahr 2024
1000 Publikationstyp
  1. Artikel |
1000 Online veröffentlicht
  • 2024-04-11
1000 Erschienen in
1000 Quellenangabe
  • 10(1):251-273
1000 Copyrightjahr
  • 2024
1000 Lizenz
1000 Verlagsversion
  • https://doi.org/10.5194/soil-10-251-2024 |
1000 Publikationsstatus
1000 Begutachtungsstatus
1000 Sprache der Publikation
1000 Abstract/Summary
  • <jats:p>Abstract. The fungal kingdom is among the most diversified kingdoms on Earth, with estimations of up to 12 million species. However, it remains poorly understood, with only 150 000 fungal species currently described. Given the major ecological role of fungi in ecosystem functioning, these numbers stress the importance of investigating fungal diversity description across different ecosystem types. Here, we explored the spatial distribution of the soil fungal diversity on a broad geographical scale, using the French Soil Quality Monitoring Network that covers the whole French territory (2171 soils sampled along a systematic grid). Fungal alpha diversity was assessed directly from soil DNA using a meta-barcoding approach by targeting the 18S rDNA gene. The total accumulated fungal diversity across France included 136 219 operational taxonomic units (OTUs), i.e., about 1 % of worldwide soil fungal diversity (based on a maximum diversity estimate of 12 million) for a territory representing only 0.3 % of the terrestrial surface on Earth. Based on this dataset, the first extensive map of fungal alpha diversity was drawn and showed a heterogeneous and spatially structured distribution in large biogeographical patterns of 231 km radius for richness (Hill diversity of order 0) and smaller patterns of 36 km radius for dominant fungi (Hill diversity of order 2). As related to other environmental parameters, the spatial distribution of fungal diversity (Hill numbers based on different orders of diversity) was mainly influenced by local filters such as soil characteristics and land management and also by global filters such as climate conditions with various relative influences. Interestingly, cropped soils exhibited the highest pool of fungal diversity relative to forest and vineyard soils. To complement this, soil fungal OTU network interactions were calculated for the different land uses across France. They varied hugely and showed a loss of 75 % of the complexity in crop systems and grasslands compared to forests and up to 83 % in vineyard systems. Overall, our study revealed that a nationwide survey with a high spatial-resolution approach is relevant for deeply investigating the spatial distribution and determinism of soil fungal diversity. Our findings provide novel insights for a better understanding of soil fungal ecology across the 18S rDNA gene and upgrade biodiversity conservation policies by supplying representative repositories dedicated to soil fungi. </jats:p>
1000 Liste der Beteiligten
  1. https://frl.publisso.de/adhoc/uri/RGplbWllbCwgQ2hyaXN0b3BoZQ==|https://frl.publisso.de/adhoc/uri/RGVxdWllZHQsIFNhbXVlbA==|https://frl.publisso.de/adhoc/uri/SG9ycmlndWUsIFdhbGlk|https://frl.publisso.de/adhoc/uri/QmFpbGx5LCBBcnRodXI=|https://frl.publisso.de/adhoc/uri/TGVsacOodnJlLCBNw6lsYW5pZQ==|https://frl.publisso.de/adhoc/uri/VHJpcGllZCwgSnVsaWU=|https://frl.publisso.de/adhoc/uri/R3VpbGxhbmQsIENoYXJsZXM=|https://frl.publisso.de/adhoc/uri/UGVycmluLCBTb2zDqG5l|https://frl.publisso.de/adhoc/uri/Q29tbWVudCwgR3dlbmRvbGluZQ==|https://frl.publisso.de/adhoc/uri/U2FieSwgTmljb2xhc8KgUC7CoEEu|https://frl.publisso.de/adhoc/uri/Sm9saXZldCwgQ2xhdWR5|https://frl.publisso.de/adhoc/uri/QmlzcG8sIEFudG9uaW8=|https://frl.publisso.de/adhoc/uri/Qm91bG9ubmUsIExpbmU=|https://frl.publisso.de/adhoc/uri/UGllcmFydCwgQW50b2luZQ==|https://frl.publisso.de/adhoc/uri/V2luY2tlciwgUGF0cmljaw==|https://frl.publisso.de/adhoc/uri/Q3J1YXVkLCBDb3Jpbm5l|https://frl.publisso.de/adhoc/uri/TWFyb24sIFBpZXJyZS1BbGFpbg==|https://frl.publisso.de/adhoc/uri/VGVycmF0LCBTw6liYXN0aWVu|https://frl.publisso.de/adhoc/uri/UmFuamFyZCwgTGlvbmVs
1000 Hinweis
  • DeepGreen-ID: f6ba8128f37f440693cc0c9d44e0b2b9 ; metadata provieded by: DeepGreen (https://www.oa-deepgreen.de/api/v1/), LIVIVO search scope life sciences (http://z3950.zbmed.de:6210/livivo), Crossref Unified Resource API (https://api.crossref.org/swagger-ui/index.html), to.science.api (https://frl.publisso.de/), ZDB JSON-API (beta) (https://zeitschriftendatenbank.de/api/), lobid - Dateninfrastruktur für Bibliotheken (https://lobid.org/resources/search)
1000 Label
1000 Dateien
1000 Objektart article
1000 Beschrieben durch
1000 @id frl:6481331.rdf
1000 Erstellt am 2024-05-23T20:37:30.388+0200
1000 Erstellt von 322
1000 beschreibt frl:6481331
1000 Zuletzt bearbeitet Mon May 27 12:35:31 CEST 2024
1000 Objekt bearb. Mon May 27 12:35:31 CEST 2024
1000 Vgl. frl:6481331
1000 Oai Id
  1. oai:frl.publisso.de:frl:6481331 |
1000 Sichtbarkeit Metadaten public
1000 Sichtbarkeit Daten public
1000 Gegenstand von

View source