First release of the Pelagic Size Structure database: global datasets of marine size spectra obtained from plankton imaging devices

  1. DUGENNE, Mathilde ORCID logo
  2. Corrales- Ugalde, Marco ORCID logo
  3. Luo, Jessica Y. ORCID logo
  4. Kiko, Rainer ORCID logo
  5. O'Brien, Todd D.
  6. Irisson, Jean-Olivier
  7. Lombard, Fabien
  8. stemmann, lars ORCID logo
  9. Stock, Charles
  10. Anderson, Clarissa R.
  11. Babin, Marcel
  12. Bhairy, Nagib
  13. Bonnet, Sophie
  14. Carlotti, Francois
  15. Cornils, Astrid ORCID logo
  16. Crockford, E. Taylor
  17. Daniel, Patrick ORCID logo
  18. Desnos, Corinne
  19. Drago, Laetitia ORCID logo
  20. Elineau, Amanda
  21. Fischer, Alexis ORCID logo
  22. Grandremy, Nina ORCID logo
  23. Grondin, Pierre-Luc ORCID logo
  24. Guidi, Lionel ORCID logo
  25. Guieu, Cecile
  26. Hauss, Helena
  27. Hayashi, Kendra
  28. Huggett, Jenny ORCID logo
  29. Jalabert, Laetitia
  30. Karp-Boss, Lee
  31. Kenitz, Kasia M.
  32. Kudela, Raphael ORCID logo
  33. Lescot, Magali ORCID logo
  34. Marec, Claudie
  35. McDonnell, Andrew
  36. Mériguet, Zoé ORCID logo
  37. Niehoff, Barbara
  38. Noyon, Margaux
  39. Panaïotis, Thelma ORCID logo
  40. Peacock, Emily
  41. Picheral, Marc
  42. Riquier, Emilie
  43. Roesler, Collin
  44. Romagnan, Jean-Baptiste
  45. Sosik, Heidi ORCID logo
  46. Spencer, Gretchen
  47. Taucher, Jan
  48. Tilliette, Chloé
  49. Vilain, Marion

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1000 Titel
  • First release of the Pelagic Size Structure database: global datasets of marine size spectra obtained from plankton imaging devices
1000 Autor/in
  1. DUGENNE, Mathilde |
  2. Corrales- Ugalde, Marco |
  3. Luo, Jessica Y. |
  4. Kiko, Rainer |
  5. O'Brien, Todd D. |
  6. Irisson, Jean-Olivier |
  7. Lombard, Fabien |
  8. stemmann, lars |
  9. Stock, Charles |
  10. Anderson, Clarissa R. |
  11. Babin, Marcel |
  12. Bhairy, Nagib |
  13. Bonnet, Sophie |
  14. Carlotti, Francois |
  15. Cornils, Astrid |
  16. Crockford, E. Taylor |
  17. Daniel, Patrick |
  18. Desnos, Corinne |
  19. Drago, Laetitia |
  20. Elineau, Amanda |
  21. Fischer, Alexis |
  22. Grandremy, Nina |
  23. Grondin, Pierre-Luc |
  24. Guidi, Lionel |
  25. Guieu, Cecile |
  26. Hauss, Helena |
  27. Hayashi, Kendra |
  28. Huggett, Jenny |
  29. Jalabert, Laetitia |
  30. Karp-Boss, Lee |
  31. Kenitz, Kasia M. |
  32. Kudela, Raphael |
  33. Lescot, Magali |
  34. Marec, Claudie |
  35. McDonnell, Andrew |
  36. Mériguet, Zoé |
  37. Niehoff, Barbara |
  38. Noyon, Margaux |
  39. Panaïotis, Thelma |
  40. Peacock, Emily |
  41. Picheral, Marc |
  42. Riquier, Emilie |
  43. Roesler, Collin |
  44. Romagnan, Jean-Baptiste |
  45. Sosik, Heidi |
  46. Spencer, Gretchen |
  47. Taucher, Jan |
  48. Tilliette, Chloé |
  49. Vilain, Marion |
1000 Verlag Copernicus Publications
1000 Erscheinungsjahr 2024
1000 Publikationstyp
  1. Artikel |
1000 Online veröffentlicht
  • 2024-06-26
1000 Erschienen in
1000 Quellenangabe
  • 16(6):2971-2999
1000 Copyrightjahr
  • 2024
1000 Lizenz
1000 Verlagsversion
  • https://doi.org/10.5194/essd-16-2971-2024 |
1000 Publikationsstatus
1000 Begutachtungsstatus
1000 Sprache der Publikation
1000 Abstract/Summary
  • <jats:p>Abstract. In marine ecosystems, most physiological, ecological, or physical processes are size dependent. These include metabolic rates, the uptake of carbon and other nutrients, swimming and sinking velocities, and trophic interactions, which eventually determine the stocks of commercial species, as well as biogeochemical cycles and carbon sequestration. As such, broad-scale observations of plankton size distribution are important indicators of the general functioning and state of pelagic ecosystems under anthropogenic pressures. Here, we present the first global datasets of the Pelagic Size Structure database (PSSdb), generated from plankton imaging devices. This release includes the bulk particle normalized biovolume size spectrum (NBSS) and the bulk particle size distribution (PSD), along with their related parameters (slope, intercept, and R2) measured within the epipelagic layer (0–200 m) by three imaging sensors: the Imaging FlowCytobot (IFCB), the Underwater Vision Profiler (UVP), and benchtop scanners. Collectively, these instruments effectively image organisms and detrital material in the 7–10 000 µm size range. A total of 92 472 IFCB samples, 3068 UVP profiles, and 2411 scans passed our quality control and were standardized to produce consistent instrument-specific size spectra averaged to 1° × 1° latitude and longitude and by year and month. Our instrument-specific datasets span most major ocean basins, except for the IFCB datasets we have ingested, which were exclusively collected in northern latitudes, and cover decadal time periods (2013–2022 for IFCB, 2008–2021 for UVP, and 1996–2022 for scanners), allowing for a further assessment of the pelagic size spectrum in space and time. The datasets that constitute PSSdb's first release are available at https://doi.org/10.5281/zenodo.11050013 (Dugenne et al., 2024b). In addition, future updates to these data products can be accessed at https://doi.org/10.5281/zenodo.7998799. </jats:p>
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1000 Liste der Beteiligten
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  1. National Oceanic and Atmospheric Administration |
  2. Horizon 2020 |
  3. Agence Nationale de la Recherche |
  4. Deutsche Forschungsgemeinschaft |
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1000 Erstellt am 2024-10-03T06:33:49.830+0200
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