The genome sequence of the Violet Carpenter Bee, Xylocopa violacea (Linnaeus, 1785): a hymenopteran species undergoing range expansion

  1. Nash, Will ORCID logo
  2. Man, Angela ORCID logo
  3. McTaggart, Seanna ORCID logo
  4. Baker, Kendall ORCID logo
  5. Barker, Tom
  6. Catchpole, Leah
  7. Durrant, Alex
  8. Gharbi, Karim ORCID logo
  9. Irish, Naomi
  10. Kaithakottil, Gemy
  11. Ku, debby ORCID logo
  12. Providence, Aaliyah ORCID logo
  13. Shaw, Felix
  14. Swarbreck, David ORCID logo
  15. Watkins, Chris
  16. McCartney, Ann M.
  17. Formenti, Giulio
  18. Mouton, Alice ORCID logo
  19. Vella, Noel
  20. von Reumont, Björn M.
  21. Vella, Adriana
  22. Haerty, Wilfried

Download
41437_2024_Article_720.pdf 1,50MB
WeightNameValue
1000 Titel
  • The genome sequence of the Violet Carpenter Bee, Xylocopa violacea (Linnaeus, 1785): a hymenopteran species undergoing range expansion
1000 Autor/in
  1. Nash, Will |
  2. Man, Angela |
  3. McTaggart, Seanna |
  4. Baker, Kendall |
  5. Barker, Tom |
  6. Catchpole, Leah |
  7. Durrant, Alex |
  8. Gharbi, Karim |
  9. Irish, Naomi |
  10. Kaithakottil, Gemy |
  11. Ku, debby |
  12. Providence, Aaliyah |
  13. Shaw, Felix |
  14. Swarbreck, David |
  15. Watkins, Chris |
  16. McCartney, Ann M. |
  17. Formenti, Giulio |
  18. Mouton, Alice |
  19. Vella, Noel |
  20. von Reumont, Björn M. |
  21. Vella, Adriana |
  22. Haerty, Wilfried |
1000 Verlag
  • Springer International Publishing
1000 Erscheinungsjahr 2024
1000 Publikationstyp
  1. Artikel |
1000 Online veröffentlicht
  • 2024-09-16
1000 Erschienen in
1000 Quellenangabe
  • 133(6):381-387
1000 Copyrightjahr
  • 2024
1000 Lizenz
1000 Verlagsversion
  • https://doi.org/10.1038/s41437-024-00720-2 |
  • https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11589580/ |
1000 Publikationsstatus
1000 Begutachtungsstatus
1000 Sprache der Publikation
1000 Abstract/Summary
  • <jats:title>Abstract</jats:title><jats:p>We present a reference genome assembly from an individual male Violet Carpenter Bee (<jats:italic>Xylocopa violacea</jats:italic>, Linnaeus 1758). The assembly is 1.02 gigabases in span. 48% of the assembly is scaffolded into 17 pseudo-chromosomal units. The mitochondrial genome has also been assembled and is 21.8 kilobases in length. The genome is highly repetitive, likely representing a highly heterochromatic architecture expected of bees from the genus <jats:italic>Xylocopa</jats:italic>. We also use an evidence-based methodology to annotate 10,152 high confidence coding genes. This genome was sequenced as part of the pilot project of the European Reference Genome Atlas (ERGA) and represents an important addition to the genomic resources available for Hymenoptera.</jats:p>
1000 Sacherschließung
lokal /631/61/212/2304
lokal /45/90
lokal Genome, Mitochondrial [MeSH]
lokal /49/91
lokal /631/61/212/2302
lokal /119
lokal Animals [MeSH]
lokal /631/61/212/2019
lokal Genome, Insect [MeSH]
lokal /631/1647/48
lokal Article
lokal Male [MeSH]
lokal Molecular Sequence Annotation [MeSH]
lokal Bees/genetics [MeSH]
lokal /45/22
lokal /45/23
lokal Sequence Analysis, DNA/methods [MeSH]
lokal /139
lokal /631/208/726
lokal article
1000 Fächerklassifikation (DDC)
1000 Liste der Beteiligten
  1. https://orcid.org/0000-0002-6790-1167|https://orcid.org/0000-0002-9596-0068|https://orcid.org/0000-0003-0977-4785|https://orcid.org/0009-0002-9437-8057|https://frl.publisso.de/adhoc/uri/QmFya2VyLCBUb20=|https://frl.publisso.de/adhoc/uri/Q2F0Y2hwb2xlLCBMZWFo|https://frl.publisso.de/adhoc/uri/RHVycmFudCwgQWxleA==|https://orcid.org/0000-0003-1092-4488|https://frl.publisso.de/adhoc/uri/SXJpc2gsIE5hb21p|https://frl.publisso.de/adhoc/uri/S2FpdGhha290dGlsLCBHZW15|https://orcid.org/0000-0001-9174-3296|https://orcid.org/0000-0002-4348-7387|https://frl.publisso.de/adhoc/uri/U2hhdywgRmVsaXg=|https://orcid.org/0000-0002-5453-1013|https://frl.publisso.de/adhoc/uri/V2F0a2lucywgQ2hyaXM=|https://frl.publisso.de/adhoc/uri/TWNDYXJ0bmV5LCBBbm4gTS4=|https://frl.publisso.de/adhoc/uri/Rm9ybWVudGksIEdpdWxpbw==|https://orcid.org/0000-0002-0598-8789|https://frl.publisso.de/adhoc/uri/VmVsbGEsIE5vZWw=|https://frl.publisso.de/adhoc/uri/dm9uIFJldW1vbnQsIEJqw7ZybiBNLg==|https://frl.publisso.de/adhoc/uri/VmVsbGEsIEFkcmlhbmE=|https://frl.publisso.de/adhoc/uri/SGFlcnR5LCBXaWxmcmllZA==
1000 Hinweis
  • DeepGreen-ID: 708bf7b2c719410981c87a023c64d6fa ; metadata provieded by: DeepGreen (https://www.oa-deepgreen.de/api/v1/), LIVIVO search scope life sciences (http://z3950.zbmed.de:6210/livivo), Crossref Unified Resource API (https://api.crossref.org/swagger-ui/index.html), to.science.api (https://frl.publisso.de/), ZDB JSON-API (beta) (https://zeitschriftendatenbank.de/api/), lobid - Dateninfrastruktur für Bibliotheken (https://lobid.org/resources/search)
1000 Label
1000 Förderer
  1. Biotechnology and Biological Sciences Research Council |
  2. Innovate UK |
  3. Deutsche Forschungsgemeinschaft |
1000 Fördernummer
  1. -
  2. -
  3. -
1000 Förderprogramm
  1. -
  2. -
  3. -
1000 Dateien
1000 Förderung
  1. 1000 joinedFunding-child
    1000 Förderer Biotechnology and Biological Sciences Research Council |
    1000 Förderprogramm -
    1000 Fördernummer -
  2. 1000 joinedFunding-child
    1000 Förderer Innovate UK |
    1000 Förderprogramm -
    1000 Fördernummer -
  3. 1000 joinedFunding-child
    1000 Förderer Deutsche Forschungsgemeinschaft |
    1000 Förderprogramm -
    1000 Fördernummer -
1000 Objektart article
1000 Beschrieben durch
1000 @id frl:6523308.rdf
1000 Erstellt am 2025-07-06T20:43:32.668+0200
1000 Erstellt von 322
1000 beschreibt frl:6523308
1000 Zuletzt bearbeitet 2025-07-30T00:30:13.778+0200
1000 Objekt bearb. Wed Jul 30 00:30:13 CEST 2025
1000 Vgl. frl:6523308
1000 Oai Id
  1. oai:frl.publisso.de:frl:6523308 |
1000 Sichtbarkeit Metadaten public
1000 Sichtbarkeit Daten public
1000 Gegenstand von

View source