Pan genome of the phytoplankton Emiliania underpins its global distribution

  1. Read, Betsy A.
  2. Kegel, Jessica
  3. Klute, Mary J.
  4. Kuo, Alan
  5. Lefebvre, Stephane C.
  6. Maumus, Florian
  7. Mayer, Christoph ORCID logo
  8. Miller, John
  9. Monier, Adam
  10. Salamov, Asaf
  11. Young, Jeremy
  12. Aguilar, Maria
  13. Claverie, Jean-Michel
  14. Frickenhaus, Stephan
  15. Gonzalez, Karina
  16. Herman, Emily K.
  17. Lin, Yao-Cheng
  18. Napier, Johnathan
  19. Ogata, Hiroyuki
  20. Sarno, Analissa F.
  21. Shmutz, Jeremy
  22. Schroeder, Declan
  23. de Vargas, Colomban
  24. Verret, Frederic
  25. von Dassow, Peter
  26. Valentin, Klaus
  27. Van de Peer, Yves
  28. Wheeler, Glen
  29. Emiliania huxleyi Annotation Consortium
  30. Dacks, Joel B.
  31. Delwiche, Charles F.
  32. Dyhrman, Sonya T.
  33. Glöckner, Gernot
  34. John, Uwe
  35. Richards, Thomas
  36. Worden, Alexandra Z.
  37. Zhang, Xiaoyu
  38. Grigoriev, Igor V.

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WeightNameValue
1000 Titel
  • Pan genome of the phytoplankton Emiliania underpins its global distribution
1000 Autor/in
  1. Read, Betsy A. |
  2. Kegel, Jessica |
  3. Klute, Mary J. |
  4. Kuo, Alan |
  5. Lefebvre, Stephane C. |
  6. Maumus, Florian |
  7. Mayer, Christoph |
  8. Miller, John |
  9. Monier, Adam |
  10. Salamov, Asaf |
  11. Young, Jeremy |
  12. Aguilar, Maria |
  13. Claverie, Jean-Michel |
  14. Frickenhaus, Stephan |
  15. Gonzalez, Karina |
  16. Herman, Emily K. |
  17. Lin, Yao-Cheng |
  18. Napier, Johnathan |
  19. Ogata, Hiroyuki |
  20. Sarno, Analissa F. |
  21. Shmutz, Jeremy |
  22. Schroeder, Declan |
  23. de Vargas, Colomban |
  24. Verret, Frederic |
  25. von Dassow, Peter |
  26. Valentin, Klaus |
  27. Van de Peer, Yves |
  28. Wheeler, Glen |
  29. Emiliania huxleyi Annotation Consortium |
  30. Dacks, Joel B. |
  31. Delwiche, Charles F. |
  32. Dyhrman, Sonya T. |
  33. Glöckner, Gernot |
  34. John, Uwe |
  35. Richards, Thomas |
  36. Worden, Alexandra Z. |
  37. Zhang, Xiaoyu |
  38. Grigoriev, Igor V. |
1000 Erscheinungsjahr 2013
1000 LeibnizOpen
1000 Art der Datei
1000 Publikationstyp
  1. Artikel |
1000 Online veröffentlicht
  • 2013-06-12
1000 Erschienen in
1000 Quellenangabe
  • 99(7457): 209-213
1000 FRL-Sammlung
1000 Copyrightjahr
  • 2013
1000 Lizenz
1000 Verlagsversion
  • https://doi.org/10.1038/nature12221 |
1000 Ergänzendes Material
  • https://www.nature.com/articles/nature12221#supplementary-information |
1000 Publikationsstatus
1000 Begutachtungsstatus
1000 Sprache der Publikation
1000 Abstract/Summary
  • Coccolithophores have influenced the global climate for over 200 million years1. These marine phytoplankton can account for 20 per cent of total carbon fixation in some systems2. They form blooms that can occupy hundreds of thousands of square kilometres and are distinguished by their elegantly sculpted calcium carbonate exoskeletons (coccoliths), rendering them visible from space3. Although coccolithophores export carbon in the form of organic matter and calcite to the sea floor, they also release CO2 in the calcification process. Hence, they have a complex influence on the carbon cycle, driving either CO2 production or uptake, sequestration and export to the deep ocean4. Here we report the first haptophyte reference genome, from the coccolithophore Emiliania huxleyi strain CCMP1516, and sequences from 13 additional isolates. Our analyses reveal a pan genome (core genes plus genes distributed variably between strains) probably supported by an atypical complement of repetitive sequence in the genome. Comparisons across strains demonstrate that E. huxleyi, which has long been considered a single species, harbours extensive genome variability reflected in different metabolic repertoires. Genome variability within this species complex seems to underpin its capacity both to thrive in habitats ranging from the equator to the subarctic and to form large-scale episodic blooms under a wide variety of environmental conditions.
1000 Sacherschließung
lokal Genetic variation
1000 Fachgruppe
  1. Biologie |
  2. Umweltwissenschaften |
1000 Fächerklassifikation (DDC)
1000 Liste der Beteiligten
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1000 Label
1000 Förderer
  1. Office of Science of the US Department of Energy (DOE)
1000 Fördernummer
  1. 7DE-AC02-05CH11231
1000 Förderprogramm
  1. -
1000 Dateien
1000 Objektart article
1000 Beschrieben durch
1000 @id frl:6408250.rdf
1000 Erstellt am 2018-06-07T13:34:53.768+0200
1000 Erstellt von 122
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1000 Zuletzt bearbeitet Thu Jan 30 21:32:19 CET 2020
1000 Objekt bearb. Thu Jun 07 13:37:31 CEST 2018
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  1. oai:frl.publisso.de:frl:6408250 |
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