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1000 Titel
  • An evaluation of performance measures for arterial brain vessel segmentation
1000 Autor/in
  1. Aydin, Orhun Utku |
  2. Taha, Abdel Aziz |
  3. Hilbert, Adam |
  4. Khalil, Ahmed A. |
  5. Galinovic, Ivana |
  6. Fiebach, Jochen B. |
  7. Frey, Dietmar |
  8. Madai, Vince Istvan |
1000 Erscheinungsjahr 2021
1000 Publikationstyp
  1. Artikel |
1000 Online veröffentlicht
  • 2021-07-16
1000 Erschienen in
1000 Quellenangabe
  • 21(1):113
1000 Copyrightjahr
  • 2021
1000 Lizenz
1000 Verlagsversion
  • https://doi.org/10.1186/s12880-021-00644-x |
  • https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8283850/ |
1000 Publikationsstatus
1000 Sprache der Publikation
1000 Abstract/Summary
  • Background!#!Arterial brain vessel segmentation allows utilising clinically relevant information contained within the cerebral vascular tree. Currently, however, no standardised performance measure is available to evaluate the quality of cerebral vessel segmentations. Thus, we developed a performance measure selection framework based on manual visual scoring of simulated segmentation variations to find the most suitable measure for cerebral vessel segmentation.!##!Methods!#!To simulate segmentation variations, we manually created non-overlapping segmentation errors common in magnetic resonance angiography cerebral vessel segmentation. In 10 patients, we generated a set of approximately 300 simulated segmentation variations for each ground truth image. Each segmentation was visually scored based on a predefined scoring system and segmentations were ranked based on 22 performance measures common in the literature. The correlation of visual scores with performance measure rankings was calculated using the Spearman correlation coefficient.!##!Results!#!The distance-based performance measures balanced average Hausdorff distance (rank = 1) and average Hausdorff distance (rank = 2) provided the segmentation rankings with the highest average correlation with manual rankings. They were followed by overlap-based measures such as Dice coefficient (rank = 7), a standard performance measure in medical image segmentation.!##!Conclusions!#!Average Hausdorff distance-based measures should be used as a standard performance measure in evaluating cerebral vessel segmentation quality. They can identify more relevant segmentation errors, especially in high-quality segmentations. Our findings have the potential to accelerate the validation and development of novel vessel segmentation approaches.
1000 Sacherschließung
lokal Cerebral Arteries/pathology [MeSH]
lokal Humans [MeSH]
lokal Software [MeSH]
lokal Segmentation
lokal Dice
lokal Image processing (computer-assisted)
lokal Ranking
lokal Cerebral Arteries/diagnostic imaging [MeSH]
lokal Segmentation measures
lokal Cerebral vessel segmentation
lokal Cerebral arteries
lokal Research
lokal Average Hausdorff distance
lokal Image Processing, Computer-Assisted [MeSH]
lokal Magnetic Resonance Angiography [MeSH]
1000 Liste der Beteiligten
  1. https://frl.publisso.de/adhoc/uri/QXlkaW4sIE9yaHVuIFV0a3U=|https://frl.publisso.de/adhoc/uri/VGFoYSwgQWJkZWwgQXppeg==|https://frl.publisso.de/adhoc/uri/SGlsYmVydCwgQWRhbQ==|https://frl.publisso.de/adhoc/uri/S2hhbGlsLCBBaG1lZCBBLg==|https://frl.publisso.de/adhoc/uri/R2FsaW5vdmljLCBJdmFuYQ==|https://frl.publisso.de/adhoc/uri/RmllYmFjaCwgSm9jaGVuIEIu|https://frl.publisso.de/adhoc/uri/RnJleSwgRGlldG1hcg==|https://frl.publisso.de/adhoc/uri/TWFkYWksIFZpbmNlIElzdHZhbg==
1000 Hinweis
  • DeepGreen-ID: 9dadcd162f8c4bc6a368311dfdd648b1 ; metadata provieded by: DeepGreen (https://www.oa-deepgreen.de/api/v1/), LIVIVO search scope life sciences (http://z3950.zbmed.de:6210/livivo), Crossref Unified Resource API (https://api.crossref.org/swagger-ui/index.html), to.science.api (https://frl.publisso.de/), ZDB JSON-API (beta) (https://zeitschriftendatenbank.de/api/), lobid - Dateninfrastruktur für Bibliotheken (https://lobid.org/resources/search)
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1000 Erstellt am 2023-11-15T13:56:31.186+0100
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1000 Zuletzt bearbeitet Thu Nov 30 20:16:37 CET 2023
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